BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F01LP1|AL429423
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1750 0.0
>3x_Contig1741
Length = 21706
Score = 1750 bits (881), Expect = 0.0
Identities = 908/915 (99%), Gaps = 3/915 (0%)
Strand = Plus / Minus
Query: 1 gatcaattaaacttgaacttgacagatgatcaagtcaaagaagttaccgctaagattaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11390 gatcaattaaacttgaacttgacagatgatcaagtcaaagaagttaccgctaagattaag 11331
Query: 61 aagcttggtgacatcagacccctaaatatcgatgatgtcgactccatcatcaaggacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11330 aagcttggtgacatcagacccctaaatatcgatgatgtcgactccatcatcaaggacttc 11271
Query: 121 catgctgaagtatctacgccgcaattgagagctgtaagaagagatgacaacgacgtcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11270 catgctgaagtatctacgccgcaattgagagctgtaagaagagatgacaacgacgtcaat 11211
Query: 181 gacattgatatccaagagccatccaacaagaaaaccaaggtagagtaaaccttaagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11210 gacattgatatccaagagccatccaacaagaaaaccaaggtagagtaaaccttaagaaag 11151
Query: 241 gaaataaacataaaagtactagaaagctcataagacaagtgtaacttcttctttttgcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11150 gaaataaacataaaagtactagaaagctcataagacaagtgtaacttcttctttttgcct 11091
Query: 301 cgttccaccaagtaccttgcttttattcacgtttatgtcaaactacatttctctcatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11090 cgttccaccaagtaccttgcttttattcacgtttatgtcaaactacatttctctcatcca 11031
Query: 361 tatattaagtatcttagtaatttattatagtaactcaatctgacacgcacaataaaaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11030 tatattaagtatcttagtaatttattatagtaactcaatctgacacgcacaataaaaggc 10971
Query: 421 gctcaaacacaggccgcaagamataaaaacttgtgcagataacagacggctggkatatat 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 10970 gctcaaacacaggccgcaagaaataaaaacttgtgcagataacagacggctggtatatat 10911
Query: 481 gcttactctcatttcttttgatgtattttctctggagtgaaaacagatggaataagccgg 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10910 gcttactctcatttcttttgatgtattttctctggagtaaaaacagatggaataagccgg 10851
Query: 541 gaagcaggacatattccgttcaaaaagaaagaccccagttctgacatgagacactaataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10850 gaagcaggacatattccgttcaaaaagaaagaccccagttctgacatgagacactaataa 10791
Query: 601 atactaacagtaactaaatgggagcccgaatccaccgcaaccgacaagacattattaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10790 atactaacagtaactaaatgggagcccgaatccaccgcaaccgacaagacattattaagg 10731
Query: 661 gtccggaaggagacttgacactatgtcactactttcatcatatataacgccattcttcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10730 gtccggaaggagacttgacactatgtcactactttcatcatatataacgccattcttcca 10671
Query: 721 tcactaaattcaagcctccctaaccaatcaggttctttagtgttctctttttcacacaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10670 tcactaaattcaagcctccctaaccaatcaggttctttagtgttctctttttcacacaca 10611
Query: 781 tttttttttgtcaaaaagtttcaccaaaaaaatggg-aaaaatataaaagg-aaagaaga 838
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 10610 tttttttttgtcaaaaagtttcaccaaaaaaatgggaaaaaatataaaaggaaaagaaga 10551
Query: 839 acctagttccccttgaaacacacatgtmttaacgaag-gggcccggaactgaaggattga 897
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 10550 acctagttccccttgaaacacacatgtcttaacgaagtgggcccggaactgaaggattga 10491
Query: 898 tcacataatttgcgt 912
|||||||||||||||
Sbjct: 10490 tcacataatttgcgt 10476
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7768
Number of Sequences: 1807
Number of extensions: 7768
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)